BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F06SP1|AL429776
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1401 1774 0.0
>3x_Contig1401
Length = 8231
Score = 1774 bits (895), Expect = 0.0
Identities = 898/899 (99%)
Strand = Plus / Plus
Query: 1 gatcaaaacagaggtggtcattcttcatctggtggtcgtggtcgtggtagaggtcgtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3508 gatcaaaacagaggtggtcattcttcatctggtggtcgtggtcgtggtagaggtcgtggc 3567
Query: 61 ggcagagaccggggtggcagaggcggcagaggccgtggttcttcttccactgactgagcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3568 ggcagagaccggggtggcagaggcggcagaggccgtggttcttcttccactgactgagcg 3627
Query: 121 tttaccttttcataatatcgaaattttccgcagcaatgctggcgctgtctaaaacgcgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3628 tttaccttttcataatatcgaaattttccgcagcaatgctggcgctgtctaaaacgcgca 3687
Query: 181 ttgaagtgcagttgaacgtaagtaaaggaaaccatatgctcctaagctcctcgttattca 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3688 ttgaagtgcagttgaacgtaagtgaaggaaaccatatgctcctaagctcctcgttattca 3747
Query: 241 tcatctctatctgattttcacgtagaaattatctttcggtagagcgaaagcatctatatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3748 tcatctctatctgattttcacgtagaaattatctttcggtagagcgaaagcatctatatg 3807
Query: 301 ttcgtcttccaacgaagtacgacgggataagaaaagtttcctgtcatccaaatcccttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3808 ttcgtcttccaacgaagtacgacgggataagaaaagtttcctgtcatccaaatcccttgc 3867
Query: 361 gtttcacgcatcattaatcattatattttgtatagtatttgatgtcatttaaatagatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3868 gtttcacgcatcattaatcattatattttgtatagtatttgatgtcatttaaatagatta 3927
Query: 421 cattattaacatttaagaacgtcaccaacatcatttttacccatactgttttcttgttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3928 cattattaacatttaagaacgtcaccaacatcatttttacccatactgttttcttgttct 3987
Query: 481 aaggaagattcagaggatcattcctgcaaataaagcactcggcttacttcatttatgggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3988 aaggaagattcagaggatcattcctgcaaataaagcactcggcttacttcatttatgggt 4047
Query: 541 aaatctgcaacaccgctagtttcattagtgatgtaccaatctaactccgagaagtttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4048 aaatctgcaacaccgctagtttcattagtgatgtaccaatctaactccgagaagtttttg 4107
Query: 601 tattcaactattctcccttgagtatcagttatcgttcgcatatcatcaagtgggaccgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4108 tattcaactattctcccttgagtatcagttatcgttcgcatatcatcaagtgggaccgtt 4167
Query: 661 aacatgtcaatattataggaaagcattccgacgtaagtgaaaagcattgtcattagtaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4168 aacatgtcaatattataggaaagcattccgacgtaagtgaaaagcattgtcattagtaca 4227
Query: 721 agacattggatggctattaaccaatatctttgaggtaatatctcgtaaacttcggctatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4228 agacattggatggctattaaccaatatctttgaggtaatatctcgtaaacttcggctatg 4287
Query: 781 gcttgtccttgtagtataatctttggtaagaatgcccacacaactataaagaagacaact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 gcttgtccttgtagtataatctttggtaagaatgcccacacaactataaagaagacaact 4347
Query: 841 aatgtggatgaaacatatacggaaaatccgccatactgtctttctttattcatttaaaa 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4348 aatgtggatgaaacatatacggaaaatccgccatactgtctttctttattcatttaaaa 4406
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6473
Number of Sequences: 1807
Number of extensions: 6473
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)